We've been using afni_proc.py to process our data and generate @ss_review scripts to review motion and censoring statistics. I recently noticed that for a participant we scanned on Oct. 29 of this year there was a total censor fraction of 2.24, which shouldn't occur since the highest fraction possible should be 1. I looked into the file a little more and discovered that it seems like the program was dividing the number of TRs censored by the total number of uncensored TRs rather than the total number of TRs (censored+uncensored). In this case, there were 246 TRs for this scan, 170 of which were censored (don't worry, we're not going to use this data), leaving 76 TRs uncensored. Instead of dividing the censored TRs by the total number of TRs (170/246=.69), the output was the number of censored TRs divided by the number of uncensored TRs (170/76=2.24), which is more like a ratio than the percentage of TRs that are censored.

I saw in the AFNI history that there was an update to gen_ss_review_scripts.py on Oct. 24, and am wondering if this update may have somehow caused this to occur. It seems to have affected all of the scripts generated that have the degrees of freedom information listed.