Hi Afni,
When I am running neurodebian's version of AFNI (0.20131204~dfsg.1-1~nd13.10+1 0), it seems to be using X11. Which is a problem because it throws an error:
freeglut (3dSkullStrip): failed to open display ':1'
when running through nipype. There is no such error when using the latest verion AFNI_2011_12_21_1014 from your server. The neurodebian repository (http://neuro.debian.net/pkgs/afni.html#binary-pkg-afni) does not show the base versions, so I am wondering if this was a error from an older version of afni.
Should I contact neurodebian?
Thanks! -aimi