AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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_durai_
February 25, 2014 01:43PM
Hi AFNI experts,

So I tried to oblique my T1 to my DWI. The output goes to Plumb instead for some reason that is not obvious to me. Thanks for your help!

3dWarp -card2oblique ./d60_1/afni_nodif_brain+orig. -prefix afni_obq_mp_ns_t3d afni_mp_ns_t3d+orig.

owner@> 3dinfo ./d60_1/afni_nodif_brain+orig. | grep Axes
++ 3dinfo: AFNI version=AFNI_2011_12_21_1014 (Jan 31 2014) [64-bit]
Data Axes Tilt: Oblique (23.657 deg. from plumb)
Data Axes Approximate Orientation:
owner@> 3dinfo afni_mp_ns_t3d+orig. | grep Axes
++ 3dinfo: AFNI version=AFNI_2011_12_21_1014 (Jan 31 2014) [64-bit]
Data Axes Tilt: Oblique (7.278 deg. from plumb)
Data Axes Approximate Orientation:
owner@> 3dinfo afni_obq_mp_ns_t3d+orig. | grep Axes
++ 3dinfo: AFNI version=AFNI_2011_12_21_1014 (Jan 31 2014) [64-bit]
Data Axes Tilt: Plumb
Data Axes Orientation:



Edited 3 time(s). Last edit at 02/25/2014 01:46PM by _durai_.
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Subject Author Posted

3dWarp not obliquing?

_durai_ February 25, 2014 01:43PM

Re: 3dWarp not obliquing?

_durai_ February 25, 2014 04:26PM

Re: 3dWarp not obliquing?

Daniel Glen February 25, 2014 05:11PM