Hi Rick,
See my answers below:
rick reynolds Wrote:
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> How many voxels are in the mask?
3dinfo -nijk mask+orig
Output: 163840
>Are they contiguous or separated?
Mostly contiguous, but some separations in inferior regions.
> Does the mask include all zero time series?
No
> Would you report the actual output to the screen?
There are over 500 lines from the 3dFWHMx output; I'm including a sampling of that here. This is for the same volunteer that I ran 3dinfo on above.
2.93307 2.61877 2.80202
2.92717 2.60991 2.81787
2.88905 2.58294 2.81423
2.83696 2.55006 2.76471
2.83054 2.54383 2.72673
2.77849 2.47901 2.53101
2.79269 2.36617 2.31874
2.80629 2.48991 2.34463
2.74902 2.44996 2.22649
2.74492 2.39764 2.40725
2.66171 2.30667 2.27463
2.71261 2.30817 2.16304
2.82534 2.47089 2.43021
2.69086 2.2941 2.17025
2.7084 2.33662 1.98733
2.69373 2.3452 2.33295
2.73649 2.29791 2.45791
2.70693 2.36403 2.38672
2.715 2.36809 2.23413
2.7659 2.44664 2.24012
2.76929 2.44589 2.61904
2.81228 2.52464 2.6272
2.82636 2.48822 2.29231
2.65763 2.23433 -1
2.78438 2.32681 2.45554
2.71898 2.36915 2.40056
2.70613 2.34907 2.44015
2.66757 2.32143 2.28309
2.77889 2.37808 2.39853
2.74377 2.40204 2.33473
2.66515 2.30972 2.28239
2.68226 2.36105 2.31552
2.73949 2.42113 2.46889
2.69082 2.35439 2.27821
2.64251 2.26937 1.8033
2.65477 2.32988 2.26655
2.71295 2.32582 2.35195
2.70105 2.29241 2.19788
2.60015 2.23423 2.13587
2.66928 2.2267 2.35495
2.70382 2.31455 2.09149
2.7284 2.24949 2.02975
2.67353 2.34673 2.21707
2.70884 2.28004 2.1717
2.74493 2.3136 2.19734
2.7228 2.36091 2.25049
2.78025 2.37293 2.23577
2.6985 2.35448 2.52819
2.76458 2.39646 2.39904
2.79465 2.41643 2.27227
2.83403 2.47519 2.52785
2.76602 2.3421 2.40214
2.67472 2.22752 -1
There are relatively few -1 values for this volunteer, but some others have quite a few more, for example:
2.23755 2.49626 2.06433
2.27402 2.32488 2.02674
2.59274 1.86659 -1
2.75306 -1 -1
2.77944 -1 -1
2.76305 2.69258 -1
2.85275 2.97965 -1
2.67311 2.96268 -1
2.69979 3.00124 -1
2.38896 2.80981 -1
2.39934 2.75108 -1
2.28532 2.7102 -1
2.24947 2.7089 -1
2.44588 2.83788 -1
2.38153 2.71889 -1
2.29368 2.72498 -1
2.17825 2.66378 -1
2.23919 2.72436 -1
2.30959 2.76007 -1
2.44982 2.6964 -1
2.22209 2.66374 2.03654
2.21643 2.64768 -1
2.20461 2.69388 -1
2.27991 2.61342 -1
2.48748 2.6819 -1
2.89813 2.88627 -1
2.53773 2.75159 -1
2.36991 2.71647 2.10215
2.32739 2.72995 -1
2.42035 2.62247 -1
2.49566 2.666 -1
2.33574 2.71693 1.85774
2.25689 2.7273 -1
2.25691 2.68583 -1
2.33044 2.47937 -1
2.45301 2.47642 -1
2.47591 2.53383 -1
2.42723 2.4688 -1
2.99302 3.22071 2.36579
2.9458 2.97784 -1
2.56516 2.75644 -1
2.56028 2.84099 -1
2.68773 2.90934 -1
2.40353 2.62402 -1
2.45285 2.61514 -1
2.35146 2.58868 -1
2.40354 2.72241 -1
2.37884 2.78234 2.28128
2.61675 2.97897 -1
2.59876 2.85403 2.36622
2.39953 2.72415 -1
2.53543 2.79335 -1
2.31696 2.77317 2.22383
2.30871 2.68821 -1
2.2883 2.73147 -1
2.25579 2.619 -1
2.14916 2.62306 -1
2.2062 2.69813 -1
2.21804 2.72345 -1
2.1369 2.62069 -1
2.26865 2.60691 -1
2.61599 2.69722 -1
2.39877 2.43721 -1
2.5816 2.77076 -1
2.85682 2.90983 -1
2.53131 2.74668 -1
2.36173 2.64388 -1
2.41427 2.66322 -1
2.35869 2.70857 -1
2.27644 2.72629 -1
2.21823 2.74431 -1
2.22288 2.55221 -1
2.26275 2.69871 -1
2.21692 2.67854 -1
