AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Peter Molfese
May 12, 2014 10:54AM
If you believe the dataset with +tlrc is actually in subject space (and not transformed into some type of standard space: MNI/TAL), then you can change it via:

3drefit -view orig -space ORIG dataset+tlrc.

I'm not immediately recalling an option in .afnirc to force things to be +orig. I suspect you're going between NIFTI and AFNI file formats and occasionally other packages (SPM/FSL) like to change a setting in the NIFTI header that makes AFNI believe it's in TAL/MNI space.



Edited 1 time(s). Last edit at 05/12/2014 10:57AM by Peter Molfese.
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Subject Author Posted

overlay ORIG file on TLRC one

ptaylor May 12, 2014 10:40AM

Re: overlay ORIG file on TLRC one

Peter Molfese May 12, 2014 10:54AM

Re: overlay ORIG file on TLRC one

ptaylor May 12, 2014 11:19AM

Re: overlay ORIG file on TLRC one

Daniel Glen May 12, 2014 11:36AM