AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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_durai_
May 28, 2014 04:20PM
Hi AFNI experts,

This is an example usage of the command from the SUMA documentation. I am having difficulty understanding why the spec file is in standard space but the smoothwm and pial are in subject space, as the spec file specifies the relationship between surfaces used?

3dVol2Surf
-spec ../SurfData/SUMA/std.DemoSubj_lh.spec \
-surf_A lh.smoothwm.asc \
-surf_B lh.pial.asc \
-sv DemoSubj_SurfVol_Alnd_Exp+orig \
-grid_parent DemoSubj_EccExpavir.DEL+orig \
-map_func ave \
-f_steps 10 \
-f_index nodes \
-out_niml v2s.lh.DEL.niml.dset

Thank you
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Subject Author Posted

3dVol2Surf surface spaces

_durai_ May 28, 2014 04:20PM

Re: 3dVol2Surf surface spaces

rick reynolds May 29, 2014 02:48PM