AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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June 15, 2014 02:11PM
Dear AFNI expert



I would like to extract the ROI mask of right thalamus from atlas in AFNI? I would like to extract right parielta lobule too.
I would like to use the extracted mask for the seed mask of tractography.

For example, we can show "-Atlas colors" by right clicking on AFNI GUI. Then, we can select right thalamus.
How can we extract the mask of this right thalamus?

Thank you for help.


Taka



Edited 1 time(s). Last edit at 06/15/2014 02:11PM by TAKA.
Subject Author Posted

How to extract ROI mask from atlas in AFNI?

TAKA June 15, 2014 02:11PM

Re: How to extract ROI mask from atlas in AFNI?

Daniel Glen June 15, 2014 05:37PM

Re: How to extract ROI mask from atlas in AFNI?

TAKA June 16, 2014 01:37AM

Re: How to extract ROI mask from atlas in AFNI?

Daniel Glen June 16, 2014 11:46AM

Re: How to extract ROI mask from atlas in AFNI?

TAKA June 16, 2014 02:12PM

Re: How to extract ROI mask from atlas in AFNI?

Daniel Glen June 16, 2014 02:26PM

Re: How to extract ROI mask from atlas in AFNI?

TAKA June 16, 2014 02:53PM

Re: How to extract ROI mask from atlas in AFNI?

Daniel Glen June 16, 2014 05:25PM

Re: How to extract ROI mask from atlas in AFNI?

TAKA June 16, 2014 08:07PM