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June 15, 2014 02:11PM
Dear AFNI expert



I would like to extract the ROI mask of right thalamus from atlas in AFNI? I would like to extract right parielta lobule too.
I would like to use the extracted mask for the seed mask of tractography.

For example, we can show "-Atlas colors" by right clicking on AFNI GUI. Then, we can select right thalamus.
How can we extract the mask of this right thalamus?

Thank you for help.


Taka



Edited 1 time(s). Last edit at 06/15/2014 02:11PM by TAKA.
Subject Author Posted

How to extract ROI mask from atlas in AFNI?

TAKA June 15, 2014 02:11PM

Re: How to extract ROI mask from atlas in AFNI?

Daniel Glen June 15, 2014 05:37PM

Re: How to extract ROI mask from atlas in AFNI?

TAKA June 16, 2014 01:37AM

Re: How to extract ROI mask from atlas in AFNI?

Daniel Glen June 16, 2014 11:46AM

Re: How to extract ROI mask from atlas in AFNI?

TAKA June 16, 2014 02:12PM

Re: How to extract ROI mask from atlas in AFNI?

Daniel Glen June 16, 2014 02:26PM

Re: How to extract ROI mask from atlas in AFNI?

TAKA June 16, 2014 02:53PM

Re: How to extract ROI mask from atlas in AFNI?

Daniel Glen June 16, 2014 05:25PM

Re: How to extract ROI mask from atlas in AFNI?

TAKA June 16, 2014 08:07PM