AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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June 25, 2014 04:48AM
Nilufar Wrote:
-------------------------------------------------------
> I am trying to use afni's MATLAB library to read
> and write surface data in .niml.dset format.
> Using 3dVoltoSurf, I converted volumetric data to
> surface data. Now, when I use this command in
> matlab:
> fn = 'surf_lh.niml.dset' %my surface data
> this error occurs:
> %%%%%%%%%%%%
> Warning: Input file seems to be not a NIML ASCII
> file, will try to convert it to ascii

NIML comes in three formats: ASCII, binary and base64. The matlab code only supports ASCII.

If the automatic invocation of ConvertDset from matlab does not work, you can make a NIML ASCII version using ConvertDset with "-o_niml_asc".
Subject Author Posted

reading/writing .niml.dset in MATLAB

Nilufar June 19, 2014 02:22PM

Re: reading/writing .niml.dset in MATLAB

rick reynolds June 23, 2014 04:14PM

Re: reading/writing .niml.dset in MATLAB

nick June 25, 2014 04:48AM

Re: reading/writing .niml.dset in MATLAB

nick June 28, 2015 09:03AM