Hi Elise,
Sorry for being slow, I thought I already replied to this.
Yes, those 0095 files would be the onsets. Depending on how
you set this up, they may or may not include pre-steady state
time before the first stimulus. If they do not, you may (or
may not) have to add it for the scanner. If they do, you may
need to subtract it before giving the files to afni_proc.py
for analysis. The timing_tool.py program can add such offsets.
Yes, those are stimulus onset times. Any time not accounted
for is jitter/baseline condition.
- rick