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July 03, 2014 12:29PM
I am getting this error message whenever I execute my 3dMVM script.
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If the program hangs here for more than, for example, half an hour,
kill the process because the model specification or the GLT coding
is likely inappropriate.
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Here is my 3dMVM script looks like:
#!/bin/tcsh
set grp1 = CON_1
set grp2 = PSP_1
set data1 = /mnt/Processing1/Priyank/RESULTS_motion1/CON_1
set data2 = /mnt/Processing1/Priyank/RESULTS_motion1/PSP_1
3dMVM -prefix /mnt/Processing1/Priyank/ANALYSIS/PSP/3dMVM.WB.CON_1-PSP_1 -jobs 4 \
-bsVars 'Group*task' \
-num_glt 5 \
-gltLabel 1 CON_1_Mean -gltCode 1 'Group : 1*CON_1' \
-gltLabel 2 PSP_1_Mean -gltCode 2 'Group : 1*PSP_1' \
-gltLabel 3 CON_1-PSP_1 -gltCode 3 'Group : 1*CON_1 -1*PSP_1' \
-gltLabel 4 CON_1-PSP_1_same_vis -gltCode 4 'task : 1*same_vis Group : 1*CON_1 -1*PSP_1' \
-gltLabel 5 CON_1-PSP_1_same_nv -gltCode 5 'task : 1*same_nv Group : 1*CON_1 -1*PSP_1' \
-dataTable \
Subj Group task InputFile \
CON_033_1 CON_1 same_vis /mnt/Processing1/Priyank/RESULTS_motion1/CON_1/CON_033_1/stats_blur4.CON_033_1+tlrc'[same_vis#0_Coef]' \
CON_033_1 CON_1 same_nv /mnt/Processing1/Priyank/RESULTS_motion1/CON_1/CON_033_1/stats_blur4.CON_033_1+tlrc'[same_nv#0_Coef]' \
......
.....
.....
PSP_008_1 PSP_1 same_nv /mnt/Processing1/Priyank/RESULTS_motion1/PSP_1/PSP_008_1/stats_blur4.PSP_008_1+tlrc'[same_nv#0_Coef]' \
PSP_013_1 PSP_1 same_vis /mnt/Processing1/Priyank/RESULTS_motion1/PSP_1/PSP_013_1/stats_blur4.PSP_013_1+tlrc'[same_vis#0_Coef]' \
PSP_013_1 PSP_1 same_nv /mnt/Processing1/Priyank/RESULTS_motion1/PSP_1/PSP_013_1/stats_blur4.PSP_013_1+tlrc'[same_nv#0_Coef]'

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Subject Author Posted

3dMVM scripting issue:

pshuk July 03, 2014 12:29PM

Re: 3dMVM scripting issue:

gang July 03, 2014 01:03PM