History of AFNI updates  

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July 29, 2014 02:52AM
Thanks Rick. I've tried to do a little bit more research and have discovered actually quite a few articles about resting-state connectivity in which they plot t-statistic maps instead of mean z-transformed correlations, e.g.
- Greicius et al. 2003 Functional connectivity in the resting brain: a network analysis of the default mode hypothesis; or
- Schwarz et al. 2013 Anti-correlated cortical networks of intrinsic connectivity in the rat brain.

However, I haven't been able to find any methodological discussion of this issue. When plotting the t-statistic map, we basically plot how significantly different from zero the correlation with the seed region time course is. In a way, this captures the notion of a connection between the seed and target regions (or voxels), although I still find the mean z-score more intuitive.

In any case, is there any reason to use one over the other?

-John
Subject Author Posted

Seed correlation analysis in AFNI explained

afniuser July 24, 2014 11:31AM

Re: Seed correlation analysis in AFNI explained

rick reynolds July 25, 2014 08:43AM

Re: Seed correlation analysis in AFNI explained

afniuser July 29, 2014 02:52AM

Re: Seed correlation analysis in AFNI explained

rick reynolds July 29, 2014 10:13AM

Re: Seed correlation analysis in AFNI explained

gang July 29, 2014 10:37AM

Re: Seed correlation analysis in AFNI explained

umeshksingla June 03, 2018 04:24PM