Hi afni message board,
I am trying to extract afni brik file data in the form of an array using mrilib.h as described in the README file. I am running into compilation issues, including abin gets me a little further but produces a different error.
This occurs with a binary install of afni (openMP 64 bit). I am wondering if I have to compile from source for the c functions to get a THD data set to work properly, or if it is possible with just the binary install.
I am having trouble compiling from source as well and am wondering if this is necissary.
I think my afni install went fine as afni opens when I enter the command in terminal.
output when I attempt to compile and link to abin:
gcc -o getData getData.c -I /home/rafael/abin
/tmp/ccZurWLQ.o: In function `main':
getData.c:(.text+0x15): undefined reference to `THD_open_dataset'
collect2: error: ld returned 1 exit status
make: *** [make] Error 1
