afni.nimh.nih.gov

Dear Peter,

Thank you very much for your suggestions, I have waited this long to be able to see the results of my analysis. Sorry for the late reply. 3dresample has solved my orientation and 3dZeropad problems. But I couldn't align my T1 data to the atlases appropriately. I have used the align_epi_anat.py script but the quality of the registration is unacceptable. I am still working on it...

Hayriye.