afni.nimh.nih.gov

Dear Peter,

I used to have difficulity in brain extraction pahse of my T1 image. This was the reason of why I want to aling SE and T1 image. I have realized that there is a resolution problem too. The problem is solved when my two image have the same resolution, orientation and slice number. @auto_tlrc also worked, now all of my data are aligned to TT_N27 atlas!


Thank you vey much for your interest and help.

Hayriye.