AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
September 04, 2014 05:10PM
Hello all,

I've been recieving the following error

3dTproject -polort 0 -input pb03.pp004s1R1woWMCSF.r01.blur+tlrc.HEAD -mask mask_group+tlrc -censor censor_pp004s1R1woWMCSF_combined_2.1D -cenmode ZERO -ort X.nocensor.xmat.1D -prefix errts.pp004s1R1woWMCSF.tproject
3dTproject: malloc.c:3096: sYSMALLOc: Assertion `(old_top == (((mbinptr) (((char *) &((av)->bins[((1) - 1) * 2])) - __builtin_offsetof (struct malloc_chunk, fd)))) && old_size == 0) || ((unsigned long) (old_size) >= (unsigned long)((((__builtin_offsetof (struct malloc_chunk, fd_nextsize))+((2 * (sizeof(size_t))) - 1)) & ~((2 * (sizeof(size_t))) - 1))) && ((old_top)->size & 0x1) && ((unsigned long)old_end & pagemask) == 0)' failed.
Abort

when using afni_proc.py.

I am running the following afni_proc.py script:

afni_proc.py -subj_id ${p}s${s}R1woWMCSF -dsets ${p}s${s}_fmri_REST1+orig.HEAD -copy_anat ${p}s${s}_t1mprage+orig -blocks despike align tlrc volreg blur mask regress -move_preproc_files -tcat_remove_first_trs 0 -volreg_align_e2a -volreg_tlrc_warp -align_opts_aea -giant_move -tlrc_base TT_icbm452+tlrc -blur_size 6 -blur_to_fwhm -mask_apply group -regress_censor_motion 0.5 -regress_censor_outliers 0.1 -regress_bandpass 0.008 0.1 -regress_apply_mot_types demean deriv -regress_run_clustsim no -regress_est_blur_epits -regress_est_blur_errts

Thanks for any help,
Tim
Subject Author Posted

Error when using afni_proc.py related to 3dTproject

TimMeeker September 04, 2014 05:10PM

Re: Error when using afni_proc.py related to 3dTproject

rick reynolds September 05, 2014 09:38AM

Re: Error when using afni_proc.py related to 3dTproject

TimMeeker September 05, 2014 02:49PM

Re: Error when using afni_proc.py related to 3dTproject

rick reynolds September 05, 2014 03:19PM

Re: Error when using afni_proc.py related to 3dTproject

TimMeeker September 05, 2014 04:22PM

Re: Error when using afni_proc.py related to 3dTproject

rick reynolds September 08, 2014 12:37PM

Re: Error when using afni_proc.py related to 3dTproject

TimMeeker September 08, 2014 12:47PM

Re: Error when using afni_proc.py related to 3dTproject

rick reynolds September 08, 2014 01:49PM

Re: Error when using afni_proc.py related to 3dTproject

rick reynolds September 09, 2014 04:43PM