Hello,
I have used AFNI (uber_subject.py) to create my statistics datasets which are stored in stats.Imag_anat2epi_REML+tlrc. But I notice that in the display, I get "activation" using FDR even in the background region. I do have a few masks stored in there: full_mask.Imag_anat2epi+tlrc and mask_epi_extents+tlrc.
I was wondering: is it possible to use these masks in the display? If so, how? Or should I process the masks outside and create a new stats file there and then display that using AFNI?
Many thanks and best wishes,
Ranjan