History of AFNI updates  

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April 22, 2016 03:50PM
Hello,

I have used AFNI (uber_subject.py) to create my statistics datasets which are stored in stats.Imag_anat2epi_REML+tlrc. But I notice that in the display, I get "activation" using FDR even in the background region. I do have a few masks stored in there: full_mask.Imag_anat2epi+tlrc and mask_epi_extents+tlrc.

I was wondering: is it possible to use these masks in the display? If so, how? Or should I process the masks outside and create a new stats file there and then display that using AFNI?

Many thanks and best wishes,
Ranjan
Subject Author Posted

Is there a way to use a mask while displaying results obtained from AFNI

maitra April 22, 2016 03:50PM

Re: Is there a way to use a mask while displaying results obtained from AFNI

rick reynolds April 22, 2016 04:00PM

Re: Is there a way to use a mask while displaying results obtained from AFNI

maitra April 22, 2016 04:21PM

Re: Is there a way to use a mask while displaying results obtained from AFNI

rick reynolds April 22, 2016 09:09PM

Re: Is there a way to use a mask while displaying results obtained from AFNI

Bob Cox April 24, 2016 04:13PM

Re: Is there a way to use a mask while displaying results obtained from AFNI

Bob Cox April 26, 2016 12:49PM