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October 29, 2014 10:46PM
Hi afni Experts,

I always use afni_proc.py to process my fMRI data. I notice that extents masking is applied in the volreg step if I use tlrc_warp on functional dataset.

I read some people's script that do not use the afni_proc.py. Not all of them use extents masking.
So I wonder whether extents masking is a necessary step? What are the benefits of using extents making?

I read the masking note of afni_proc.py many times. But I still can not able to fully comprehend the necessities of this step.
Thanks a lot!

Best,
Lz
Subject Author Posted

Is Extents masking a necessary step?

lzhyoung October 29, 2014 10:46PM

Re: Is Extents masking a necessary step?

rick reynolds November 03, 2014 10:40AM