AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Emily
November 10, 2014 11:23AM
Hello AFNI experts,

I planned to use 3dFWHMx since I resampled my data and will need to get the new blur estimates.

It is resting state data, so I planned to use the errts file as the input into 3dFWHMx. The data was processed using afni proc py, example number 9 for resting state data.

Do I need to use any additional options in 3dFWHMx such as demed, unif, or detrend?

Then I would use the arithmetic/geometric means for each subject, correct?

Also, is it possible to have these overall means written out in a text file since I had planned to do a bunch of subjects at once?

Thanks,
Emily
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Subject Author Posted

3dFWHMx

Emily November 10, 2014 11:23AM

Re: 3dFWHMx

Peter Molfese November 10, 2014 11:40AM

Re: 3dFWHMx

Emily November 10, 2014 11:23PM