AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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March 06, 2015 03:31PM
Hi Rick,

Sorry for the long delay in replying to you. We had to replace computers in the lab, so I'm finally able to respond. Here's what I get when comparing the headers of the sulcal ROI created in Brainvisa to the T1 anatomy:
name offset nvals values
------------------- ------ ----- ------
dim 40 8 3 256 256 166 1 1 1 1
dim 40 8 3 166 256 256 1 1 1 1
pixdim 76 8 1.0 0.9375 0.9375 1.2 0.0 0.0 0.0 0.0
pixdim 76 8 -1.0 1.2 0.9375 0.9375 1.0 1.0 1.0 1.0
vox_offset 108 1 6352.0
vox_offset 108 1 352.0
xyzt_units 123 1 2
xyzt_units 123 1 0
sform_code 254 1 1
sform_code 254 1 0
quatern_b 256 1 -0.5
quatern_b 256 1 0.0
quatern_c 260 1 0.5
quatern_c 260 1 1.0
quatern_d 264 1 -0.5
quatern_d 264 1 0.0
qoffset_x 268 1 -104.089996
qoffset_x 268 1 -98.400002
qoffset_y 272 1 156.994995
qoffset_y 272 1 -120.0
qoffset_z 276 1 91.644798
qoffset_z 276 1 -120.0
srow_x 280 4 -0.0 -0.0 1.2 -104.089996
srow_x 280 4 0.0 0.0 0.0 0.0
srow_y 296 4 -0.9375 -0.0 -0.0 156.994995
srow_y 296 4 0.0 0.0 0.0 0.0
srow_z 312 4 0.0 -0.9375 0.0 91.644798
srow_z 312 4 0.0 0.0 0.0 0.0


Does this help figure out how to get them to lay on top of one another?

Thanks,
Lisa
Subject Author Posted

Brainvisa sulcal ROI into AFNI?

lteyler December 05, 2014 05:42PM

Re: Brainvisa sulcal ROI into AFNI?

rick reynolds December 08, 2014 01:41PM

Re: Brainvisa sulcal ROI into AFNI?

lteyler March 06, 2015 03:31PM