AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
March 17, 2015 12:27PM
Thanks for your reply. I am a newbie with afni, so pardon my ignorance.

I would like to avoid aligning stats and anat as it adds another step of interpolation. Is it possible to concatenate the warp from epi->anat->tlrc and then apply it directly to stats+orig?

I had tried to compute and concatenate the transformation matrices (epi->anat->tlrc) and then use 3dAllineate on stats+orig but then the q values from FDR curves were not working in afni gui.
Subject Author Posted

Best way to transform stats+orig to stats+tlrc

udaykurkure March 16, 2015 11:32PM

Re: Best way to transform stats+orig to stats+tlrc

Peter Molfese March 17, 2015 11:49AM

Re: Best way to transform stats+orig to stats+tlrc

udaykurkure March 17, 2015 12:27PM

Re: Best way to transform stats+orig to stats+tlrc

Peter Molfese March 17, 2015 01:40PM