AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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March 18, 2015 02:52PM
Hello AFNI experts,

I have registered my DWI images to a T1 (a T1 that was made to look like a T2 thanks to a script from Paul Taylor) using align_epi_anat.py.

Now, I would like to rotate the bvecs.

I found on a website that I could use: @rotatevectorsallx1 volreg_dset bvec.1D

However, this @rotatevectorsallx1 does not exist in my afni version ( I have the latest compiled afni).

What might be the best way to perform this rotation?

Thanks,

Emily
Subject Author Posted

Rotating Vectors

Emily March 18, 2015 02:52PM

Re: Rotating Vectors

Peter Molfese March 18, 2015 03:18PM

Re: Rotating Vectors

Emily March 18, 2015 03:35PM

Re: Rotating Vectors

Peter Molfese March 18, 2015 03:58PM

Re: Rotating Vectors

Emily March 18, 2015 04:10PM

Re: Rotating Vectors

Emily March 19, 2015 04:34PM

Re: Rotating Vectors

Peter Molfese March 22, 2015 09:18AM

Re: Rotating Vectors

Daniel Glen March 18, 2015 04:46PM

Re: Rotating Vectors

Peter Molfese March 19, 2015 02:50PM

Re: Rotating Vectors

Emily March 19, 2015 04:37PM

Re: Rotating Vectors

Emily March 20, 2015 12:00PM

Re: Rotating Vectors

Peter Molfese March 23, 2015 11:35AM