History of AFNI updates  

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March 27, 2015 05:35PM
Hi,

I have the following task (imagination experiment): Task and rest blocks had a duration of 30 s and were played out in the following order: rest, task, rest, task, rest, task, rest, totaling 105 repetitions. There were 2s between each scan.

From what I understand i should use @make_stim_file.

@make_stim_file -outfile imagination_out

headers -> imag
'imag' -> 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
3

How do I get the zeros for the last rest phase? Is there an easier way to write 16:30? Finally, I presume that the time between scans (2s) will be used to calculate the HRF. Where is this done? In 3Ddeconvolve (processed by afni_proc.py)? How is it put in as an input?

Many thanks,
Ranjan
Subject Author Posted

creating a HRF

maitra March 27, 2015 05:35PM

Re: creating a HRF

rick reynolds March 27, 2015 10:03PM

Re: creating a HRF -- questions with afni_proc.py script and 3dLME

maitra March 28, 2015 09:23AM

Re: creating a HRF

maitra March 30, 2015 02:21PM

Re: creating a HRF

rick reynolds March 30, 2015 05:10PM