Hi,
Following is my code for 3dLME
3dLME -prefix ~/LME_DMN_ADHD200_ALL -jobs 40 -model "diag+sex+age+IQ" -ranEff '~1' -qVars "sex,age,IQ" -SS_type 3 \
-num_glt 24 \
-gltLabel 1 'IQ-DIAG' -gltCode 1 'diag : 1*IQ ' \
-gltLabel 2 'TDC-IQ' -gltCode 2 'IQ : 1*tdc ' \
-gltLabel 3 'TDC-SEX' -gltCode 3 'sex : 1*tdc ' \
-gltLabel 4 'TDC-AGE' -gltCode 4 'age : 1*tdc ' \
-gltLabel 5 'ADHDC-DIAG' -gltCode 5 'diag : 1*adhdc ' \
-gltLabel 6 'ADHDC-IQ' -gltCode 6 'IQ : 1*adhdc ' \
-gltLabel 7 'ADHDC-SEX' -gltCode 7 'sex : 1*adhdc ' \
-gltLabel 8 'ADHDC-AGE' -gltCode 8 'age : 1*adhdc ' \
-gltLabel 9 'ADHD1-DIAG' -gltCode 9 'diag : 1*adhd1 ' \
-gltLabel 10 'ADHD1-IQ' -gltCode 10 'IQ : 1*adhd1 ' \
-gltLabel 11 'ADHD1-SEX' -gltCode 11 'sex : 1*adhd1 ' \
-gltLabel 12 'ADHD1-AGE' -gltCode 12 'age : 1*adhd1 ' \
-gltLabel 13 'TDC-ADHD1-DIAG' -gltCode 13 'diag : 1*tdc -1*adhd1' \
-gltLabel 14 'TDC-ADHD1-IQ' -gltCode 14 'IQ : 1*tdc -1*adhd1' \
-gltLabel 15 'TDC-ADHD1-AGE' -gltCode 15 'age : 1*tdc -1*adhd1' \
-gltLabel 16 'TDC-ADHD1-SEX' -gltCode 16 'sex : 1*tdc -1*adhd1' \
-gltLabel 17 'TDC-ADHDC-DIAG' -gltCode 17 'diag : 1*tdc -1*adhdc' \
-gltLabel 18 'TDC-ADHDC-IQ' -gltCode 18 'IQ : 1*tdc -1*adhdc' \
-gltLabel 19 'TDC-ADHDC-AGE' -gltCode 19 'age : 1*tdc -1*adhdc' \
-gltLabel 20 'TDC-ADHDC-SEX' -gltCode 20 'sex : 1*tdc -1*adhdc' \
-gltLabel 21 'ADHDC-ADHD1-DIAG' -gltCode 21 'diag : 1*adhdc -1*adhd1' \
-gltLabel 22 'ADHDC-ADHD1-IQ' -gltCode 22 'IQ : 1*adhdc -1*adhd1' \
-gltLabel 23 'ADHDC-ADHD1-AGE' -gltCode 23 'age : 1*adhdc -1*adhd1' \
-gltLabel 24 'ADHDC-ADHD1-SEX' -gltCode 24 'age : 1*adhdc -1*adhd1' \
-dataTable Subj diag sex age IQ InputFile \
t01 tdc 1 9.49 140 group.TDC/subj.TDC1/rest_proc/GCOR_Z_subj.TDC1+tlrc.HEAD \
t02 tdc 1 9.18 126 group.TDC/subj.TDC2/rest_proc/GCOR_Z_subj.TDC2+tlrc.HEAD \
........
In the output I can see only the contrast of groups with DIAG
why no other contrast appears in the result?
I am interested to see the effect of IQ, SEX, and AGE wtih the disease groups both alone and intergroup
Is there anything wrong they way I model it?
Waitng for your reply.
Thank you.
Regards
Naveed
