AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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April 08, 2015 06:45PM
Dear AFNI experts,

I am interested in getting single coordinates from a template (e.g., MNI) space into individual subject space in approximately the same spatial/anatomical location.

This process will need to take about 20 mins or less.

My idea is to compute a non-linear warp from individual space to the template, and then use the inverse warp from this to convert single coordinates in template space to individual space.

3dQwarp is too slow so I will likely not use it. Is my best option then to simply talairach (e.g., via auto_tlrc), or is there a faster non-linear option?

Once I have used a warping procedure, is there a way to compute an inverse warp and then use that warp to convert single coordinates from the template to the individual? I am most interested in warping single coordinates and not whole-brain images as, if possible, this should be *much* faster.

Any ideas are appreciated,

Matthew
Subject Author Posted

Warping single coordinates to individual space

Matthew_2 April 08, 2015 06:45PM

Re: Warping single coordinates to individual space

Daniel Glen April 08, 2015 07:17PM

Re: Warping single coordinates to individual space

Matthew_2 April 08, 2015 07:22PM