AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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ziad
April 13, 2015 05:40PM
Hi Ranjan,

You can certainly do this. I take it that you have single-subject results here so the usual approach is to map the data onto that subject's own surface model. For this work however you will need to have surface models created for that subject (with FreeSurfer for instance). If you don't want to go through that process, you can transform your subject's result to standard space (uber_subject.py will do that for you), then project the data onto surfaces for the N27 brain (http://afni.nimh.nih.gov/pub/dist/doc/htmldoc/installations/TemplateSurfaces/TemplateSurfaces.html).

I highly recommend you go through the documentation for SUMA before you dive into this. You can download our class material and follow the quick-tour instructions from [afni.nimh.nih.gov] .

cheers,
Ziad
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Subject Author Posted

using SUMA to display activation onto a volume

maitra April 10, 2015 01:05AM

Re: using SUMA to display activation onto a volume

ziad April 13, 2015 05:40PM

Re: using SUMA to display activation onto a volume

maitra April 16, 2015 06:15PM

Re: using SUMA to display activation onto a volume

Daniel Glen April 20, 2015 05:11PM