Hi All,

I'm trying to run 3dSkullstrip from an SSH connection. If I don't allow for X11 forwarding, 3dSkullstrip fails (output below). This would be fine except that some times I want to disconnect my SSH connection, run it with its own nohup commend or using the screen command. Any time I disconnect the ssh session, I relinquish X11 forwarding and 3dSkullstrip fails. Any way around this?

Thanks for your help!

-Andrew

"afni -ver" from the server I connect to:
Precompiled binary =Debian-x86_64-1-gnu: Dec 26 2014 (Version AFNI_2011_12_21_1014)


Output
#++ align_epi_anat version: 1.48
#++ turning off volume registration
#Script is running (command trimmed):
3dAttribute DELTA ./Subject7_3rdGrader_CrummyJob_Vid1_tshift+orig
#Script is running (command trimmed):
3dAttribute DELTA ./Subject7_3rdGrader_CrummyJob_Vid1_tshift+orig
#Script is running (command trimmed):
3dAttribute DELTA ./Anatomy_deobl+orig
#++ Multi-cost is lpc
#++ Removing all the temporary files
#Script is running:
\rm -f ./__tt_Subject7_3rdGrader_CrummyJob_Vid1_tshift*
#Script is running:
\rm -f ./__tt_Anatomy_deobl*
#Script is running (command trimmed):
3dcopy ./Anatomy_deobl+orig ./__tt_Anatomy_deobl+orig
++ 3dcopy: AFNI version=AFNI_2011_12_21_1014 (Dec 26 2014) [64-bit]
#++ Removing skull from anat data
#Script is running (command trimmed):
3dSkullStrip -orig_vol -input ./__tt_Anatomy_deobl+orig -prefix ./__tt_Anatomy_deobl_ns
freeglut (3dSkullStrip): failed to open display 'localhost:12.0'
** ERROR: Could not strip skull



Edited 1 time(s). Last edit at 08/02/2015 05:52PM by mattare2.