AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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August 13, 2015 10:19AM
What kind of machine you running? I'm going to *guess* Linux/Ubuntu-- if not, then the rest of this may be useless. Or maybe not.

I *very* recently ran into this on an Ubuntu 15.04, which had R 3.1.2, I believe, and for some reason, I had a similar issue with phia, afex, and 4 other packages. Gang was able to point me along the road to salvation, basically by downloading the packages directly and instructing them to be installed (magically in the right spot).

I ran the following from a commandline-- I'm including a coupla comments with '#'s, and all 6 of the packages that didn't work for me, for completeness. You can run these commands from anywhere on your system, I did it from ~/Downloads. The 'R CMD INSTALL' should be able to find out where to install the R packages on your system:

# need to get 'car' for 'phia', below
# had to get **this** version as most uptodate one that would work on
# R 3.1.2 and not >=3.2.0 wget
wget [cran.r-project.org]
R CMD INSTALL car_2.0-22.tar.gz

wget [cran.r-project.org]
R CMD INSTALL phia_0.2-0.tar.gz

wget [cran.r-project.org]
R CMD INSTALL snow_0.3-13.tar.gz

wget [cran.r-project.org]
R CMD INSTALL lme4_1.1-8.tar.gz

wget [cran.r-project.org]
R CMD INSTALL afex_0.13-145.tar.gz

wget [cran.r-project.org]
R CMD INSTALL paran_1.5.1.tar.gz

wget [cran.r-project.org]
R CMD INSTALL    psych_1.5.6.tar.gz


Now, of course, if you are having different troubles, then ok...

--pt



Edited 2 time(s). Last edit at 08/13/2015 10:21AM by ptaylor.
Subject Author Posted

Cannot install phia or afex

Thomas August 13, 2015 09:57AM

Re: Cannot install phia or afex

ptaylor August 13, 2015 10:19AM

Re: Cannot install phia or afex

ptaylor August 13, 2015 10:24AM

Re: Cannot install phia or afex

Peter Molfese August 13, 2015 10:33AM

Re: Cannot install phia or afex

gang August 13, 2015 10:40AM