Hi, I am trying to run a 3dLME, and am getting there error:
Error in if (len%%wd != 0) errex.AFNI(paste("The content under -dataTable is not rectangular !", :
argument is of length zero
Calls: process.LME.opts
Execution halted
I posted my command and dataTable below. I cannot find any problem with it. Any suggestion how to fix this please?
Thanks!
3dLME -prefix CtxEGNG_RespXGroupXAge_fromRespXCtxGLMs_GraymaterMask_3DLME_ss3 \
-mask MNI152_T1_3mm_brain_graymattermask.nii.gz \
-jobs 4 \
-model "Target*Group*Age" \
-qVars "Age" \
-qVarCenters "23.77692" \
-ranEff '~1' -SS_type 3 \
-num_glt 4 \
-gltLabel 1 'HC-BN_Go-Nogo' -gltCode 1 'Target : 1*Go -1*NoGo Group : -1*BN +1*HC' \
-gltLabel 2 'HC-BN_Nogo' -gltCode 2 'Target : 1*NoGo Group : -1*BN +1*HC' \
-gltLabel 3 'HC-BN_Go' -gltCode 3 'Group : -1*BN +1*HC Target : 1*Go' \
-gltLabel 4 'HC-BN_Nogo-Go' -gltCode 4 'Target : 1*NoGo -1*Go Group : -1*BN +1*HC' \
-dataTable @BN_CtxEGNG_RespXCtx_table.txt
Where BN_CtxEGNG_RespXCtx_table.txt contains:
Subj Age Target Group InputFile\
'BN100 22.5 Go BN BN_CtxEGNG_RespXCtx_BN100_bucket+tlrc[Go#0_Coef]'\
'BN100 22.5 NoGo BN BN_CtxEGNG_RespXCtx_BN100_bucket+tlrc[NoGo#0_Coef]'\
'BN101 26.4 Go BN BN_CtxEGNG_RespXCtx_BN101_bucket+tlrc[Go#0_Coef]'\
'BN101 26.4 NoGo BN BN_CtxEGNG_RespXCtx_BN101_bucket+tlrc[NoGo#0_Coef]'\
'BN102 23.8 Go BN BN_CtxEGNG_RespXCtx_BN102_bucket+tlrc[Go#0_Coef]'\
'BN102 23.8 NoGo BN BN_CtxEGNG_RespXCtx_BN102_bucket+tlrc[NoGo#0_Coef]'\
'BN103 22.2 Go BN BN_CtxEGNG_RespXCtx_BN103_bucket+tlrc[Go#0_Coef]'\
'BN103 22.2 NoGo BN BN_CtxEGNG_RespXCtx_BN103_bucket+tlrc[NoGo#0_Coef]'\
'BN104 18.6 Go BN BN_CtxEGNG_RespXCtx_BN104_bucket+tlrc[Go#0_Coef]'\
'BN104 18.6 NoGo BN BN_CtxEGNG_RespXCtx_BN104_bucket+tlrc[NoGo#0_Coef]'\
'BN105 28.7 Go BN BN_CtxEGNG_RespXCtx_BN105_bucket+tlrc[Go#0_Coef]'\
'BN105 28.7 NoGo BN BN_CtxEGNG_RespXCtx_BN105_bucket+tlrc[NoGo#0_Coef]'\
'BN106 18.4 Go BN BN_CtxEGNG_RespXCtx_BN106_bucket+tlrc[Go#0_Coef]'\
'BN106 18.4 NoGo BN BN_CtxEGNG_RespXCtx_BN106_bucket+tlrc[NoGo#0_Coef]'\
'BN107 28.4 Go BN BN_CtxEGNG_RespXCtx_BN107_bucket+tlrc[Go#0_Coef]'\
'BN107 28.4 NoGo BN BN_CtxEGNG_RespXCtx_BN107_bucket+tlrc[NoGo#0_Coef]'\
'BN110 29.2 Go BN BN_CtxEGNG_RespXCtx_BN110_bucket+tlrc[Go#0_Coef]'\
'BN110 29.2 NoGo BN BN_CtxEGNG_RespXCtx_BN110_bucket+tlrc[NoGo#0_Coef]'\
'BN111 32.8 Go BN BN_CtxEGNG_RespXCtx_BN111_bucket+tlrc[Go#0_Coef]'\
'BN111 32.8 NoGo BN BN_CtxEGNG_RespXCtx_BN111_bucket+tlrc[NoGo#0_Coef]'\
'BN114 22.3 Go BN BN_CtxEGNG_RespXCtx_BN114_bucket+tlrc[Go#0_Coef]'\
'BN114 22.3 NoGo BN BN_CtxEGNG_RespXCtx_BN114_bucket+tlrc[NoGo#0_Coef]'\
'BN115 21.5 Go BN BN_CtxEGNG_RespXCtx_BN115_bucket+tlrc[Go#0_Coef]'\
'BN115 21.5 NoGo BN BN_CtxEGNG_RespXCtx_BN115_bucket+tlrc[NoGo#0_Coef]'\
'BN116 22.2 Go BN BN_CtxEGNG_RespXCtx_BN116_bucket+tlrc[Go#0_Coef]'\
'BN116 22.2 NoGo BN BN_CtxEGNG_RespXCtx_BN116_bucket+tlrc[NoGo#0_Coef]'\
'BN118 24.1 Go BN BN_CtxEGNG_RespXCtx_BN118_bucket+tlrc[Go#0_Coef]'\
'BN118 24.1 NoGo BN BN_CtxEGNG_RespXCtx_BN118_bucket+tlrc[NoGo#0_Coef]'\
'BN119 27.3 Go BN BN_CtxEGNG_RespXCtx_BN119_bucket+tlrc[Go#0_Coef]'\
'BN119 27.3 NoGo BN BN_CtxEGNG_RespXCtx_BN119_bucket+tlrc[NoGo#0_Coef]'\
'BN120 23.3 Go BN BN_CtxEGNG_RespXCtx_BN120_bucket+tlrc[Go#0_Coef]'\
'BN120 23.3 NoGo BN BN_CtxEGNG_RespXCtx_BN120_bucket+tlrc[NoGo#0_Coef]'\
'BN121 31.6 Go BN BN BN_CtxEGNG_RespXCtx_BN121_bucket+tlrc[Go#0_Coef]'\
'BN121 31.6 NoGo BN BN_CtxEGNG_RespXCtx_BN121_bucket+tlrc[NoGo#0_Coef]'\
'BN122 30.8 Go BN BN_CtxEGNG_RespXCtx_BN122_bucket+tlrc[Go#0_Coef]'\
'BN122 30.8 NoGo BN BN_CtxEGNG_RespXCtx_BN122_bucket+tlrc[NoGo#0_Coef]'\
'BN125 24.3 Go BN BN_CtxEGNG_RespXCtx_BN125_bucket+tlrc[Go#0_Coef]'\
'BN125 24.3 NoGo BN BN_CtxEGNG_RespXCtx_BN125_bucket+tlrc[NoGo#0_Coef]'\
'SC01717 20.5 Go HC BN_CtxEGNG_RespXCtx_SC01717_bucket+tlrc[Go#0_Coef]'\
'SC01717 20.5 NoGo HC BN_CtxEGNG_RespXCtx_SC01717_bucket+tlrc[NoGo#0_Coef]'\
'SC01792 20.1 Go HC BN_CtxEGNG_RespXCtx_SC01792_bucket+tlrc[Go#0_Coef]'\
'SC01792 20.1 NoGo HC BN_CtxEGNG_RespXCtx_SC01792_bucket+tlrc[NoGo#0_Coef]'\
'SC01793 18.3 Go HC BN_CtxEGNG_RespXCtx_SC01793_bucket+tlrc[Go#0_Coef]'\
'SC01793 18.3 NoGo HC BN_CtxEGNG_RespXCtx_SC01793_bucket+tlrc[NoGo#0_Coef]'\
'SC01818 19.9 Go HC BN_CtxEGNG_RespXCtx_SC01818_bucket+tlrc[Go#0_Coef]'\
'SC01818 19.9 NoGo HC BN_CtxEGNG_RespXCtx_SC01818_bucket+tlrc[NoGo#0_Coef]'\
'SC01868 24.1 Go HC BN_CtxEGNG_RespXCtx_SC01868_bucket+tlrc[Go#0_Coef]'\
'SC01868 24.1 NoGo HC BN_CtxEGNG_RespXCtx_SC01868_bucket+tlrc[NoGo#0_Coef]'\
'SC01888 21.0 Go HC BN_CtxEGNG_RespXCtx_SC01888_bucket+tlrc[Go#0_Coef]'\
'SC01888 21.0 NoGo HC BN_CtxEGNG_RespXCtx_SC01888_bucket+tlrc[NoGo#0_Coef]'\
'SC01890 21.5 Go HC BN_CtxEGNG_RespXCtx_SC01890_bucket+tlrc[Go#0_Coef]'\
'SC01890 21.5 NoGo HC BN_CtxEGNG_RespXCtx_SC01890_bucket+tlrc[NoGo#0_Coef]'\
'SC01891 23.8 Go HC BN_CtxEGNG_RespXCtx_SC01891_bucket+tlrc[Go#0_Coef]'\
'SC01891 23.8 NoGo HC BN_CtxEGNG_RespXCtx_SC01891_bucket+tlrc[NoGo#0_Coef]'\
'SC01892 23.5 Go HC BN_CtxEGNG_RespXCtx_SC01892_bucket+tlrc[Go#0_Coef]'\
'SC01892 23.5 NoGo HC BN_CtxEGNG_RespXCtx_SC01892_bucket+tlrc[NoGo#0_Coef]'\
'SC01893 20.9 Go HC BN_CtxEGNG_RespXCtx_SC01893_bucket+tlrc[Go#0_Coef]'\
'SC01893 20.9 NoGo HC BN_CtxEGNG_RespXCtx_SC01893_bucket+tlrc[NoGo#0_Coef]'\
'SC01906 21.7 Go HC BN_CtxEGNG_RespXCtx_SC01906_bucket+tlrc[Go#0_Coef]'\
'SC01906 21.7 NoGo HC BN_CtxEGNG_RespXCtx_SC01906_bucket+tlrc[NoGo#0_Coef]'\
'SC01916 24.8 Go HC BN_CtxEGNG_RespXCtx_SC01916_bucket+tlrc[Go#0_Coef]'\
'SC01916 24.8 NoGo HC BN_CtxEGNG_RespXCtx_SC01916_bucket+tlrc[NoGo#0_Coef]'\
'SC01921 18.7 Go HC BN_CtxEGNG_RespXCtx_SC01921_bucket+tlrc[Go#0_Coef]'\
'SC01921 18.7 NoGo HC BN_CtxEGNG_RespXCtx_SC01921_bucket+tlrc[NoGo#0_Coef]'\
'SC01922 24.6 Go HC BN_CtxEGNG_RespXCtx_SC01922_bucket+tlrc[Go#0_Coef]'\
'SC01922 24.6 NoGo HC BN_CtxEGNG_RespXCtx_SC01922_bucket+tlrc[NoGo#0_Coef]'\
'SC01923 24.0 Go HC BN_CtxEGNG_RespXCtx_SC01923_bucket+tlrc[Go#0_Coef]'\
'SC01923 24.0 NoGo HC BN_CtxEGNG_RespXCtx_SC01923_bucket+tlrc[NoGo#0_Coef]'\
'SC01928 24.0 Go HC BN_CtxEGNG_RespXCtx_SC01928_bucket+tlrc[Go#0_Coef]'\
'SC01928 24.0 NoGo HC BN_CtxEGNG_RespXCtx_SC01928_bucket+tlrc[NoGo#0_Coef]'\
'SC01943 24.6 Go HC BN_CtxEGNG_RespXCtx_SC01943_bucket+tlrc[Go#0_Coef]'\
'SC01943 24.6 NoGo HC BN_CtxEGNG_RespXCtx_SC01943_bucket+tlrc[NoGo#0_Coef]'\
'SC01953 23.3 Go HC BN_CtxEGNG_RespXCtx_SC01953_bucket+tlrc[Go#0_Coef]'\
'SC01953 23.3 NoGo HC BN_CtxEGNG_RespXCtx_SC01953_bucket+tlrc[NoGo#0_Coef]'\
'SC01958 25.1 Go HC BN_CtxEGNG_RespXCtx_SC01958_bucket+tlrc[Go#0_Coef]'\
'SC01958 25.1 NoGo HC BN_CtxEGNG_RespXCtx_SC01958_bucket+tlrc[NoGo#0_Coef]'\
'SC01959 24.5 Go HC BN_CtxEGNG_RespXCtx_SC01959_bucket+tlrc[Go#0_Coef]'\
'SC01959 24.5 NoGo HC BN_CtxEGNG_RespXCtx_SC01959_bucket+tlrc[NoGo#0_Coef]'
