AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
August 27, 2015 08:02PM
Hi there,

Yes that does seem strange now you mention it!

I double-checked my script and I am definitely using each subject's brain mask and sqrt_ResMS image to estimate their smoothing amount. So perhaps the -2difMAD option isn't appropriate or needed with this type of input?

It may actually be the case that my original estimates of 13-14mm are the correct ones - my preprocessing pipeline in SPM interpolates the images twice (once for motion and distortion correction, and once when warping to standard space).

Thanks for your help!
Subject Author Posted

3dFWHMx with SPM ResMS image

lewe004 August 26, 2015 11:46PM

Re: 3dFWHMx with SPM ResMS image

rick reynolds August 27, 2015 09:30AM

Re: 3dFWHMx with SPM ResMS image

lewe004 August 27, 2015 08:02PM

Re: 3dFWHMx with SPM ResMS image

Emily February 09, 2017 01:32PM

Re: 3dFWHMx with SPM ResMS image

gang February 10, 2017 04:13PM