AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
November 24, 2015 02:52PM
Hi!
I used 3dUniformize -anat VMR.ss+tlrc -prefix VMR.ss_norm for the normalization.

Regarding the alignment, I got it to work now by first running Align_centers and then using the shifted data set as input to align_epi_anat.py; the other important change was to use -EPI in the Allineate_opts.

Caspar
Subject Author Posted

NameError: global name 'anat_tlrc' is not defined

casparms November 20, 2015 01:07PM

Re: NameError: global name 'anat_tlrc' is not defined

rick reynolds November 23, 2015 01:34PM

Re: NameError: global name 'anat_tlrc' is not defined

casparms November 23, 2015 02:26PM

Re: NameError: global name 'anat_tlrc' is not defined

rick reynolds November 23, 2015 09:33PM

Re: NameError: global name 'anat_tlrc' is not defined

casparms November 24, 2015 02:52PM