AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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February 12, 2016 09:05AM
hi

at least with my afni_proc.py output there is a script in the results directory called @ss_review_basic that gives this information--for instance, from one of my participants towards the end of the output of the script (this is for RSA so I have 32 different stim classes):



TRs censored : 21
censor fraction : 0.020588
num regs of interest : 32
num TRs per stim (orig) : 48 51 51 53 51 52 54 51 50 51 53 52 50 49 51 51 50 51 48 51 51 51 52 50 52 54 51 50 51 50 50 49
num TRs censored per stim : 0 0 0 0 2 0 2 0 0 2 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 3 0 0
fraction TRs censored : 0.000 0.000 0.000 0.000 0.039 0.000 0.037 0.000 0.000 0.039 0.000 0.000 0.020 0.041 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.037 0.020 0.000 0.000 0.060 0.000 0.000
ave mot per sresp (orig) : 0.051237 0.039760 0.045477 0.049369 0.046991 0.050536 0.047104 0.038580 0.039008 0.048854 0.050452 0.039062 0.046649 0.051348 0.047921 0.049071 0.040155 0.045306 0.048085 0.039952 0.041967 0.041600 0.040325 0.052525 0.046292 0.046770 0.047871 0.044128 0.041163 0.044496 0.049083 0.044222
ave mot per sresp (cens) : 0.051237 0.039760 0.045477 0.049369 0.044236 0.050536 0.044512 0.038580 0.039008 0.042244 0.050452 0.039062 0.043028 0.046467 0.047921 0.049071 0.040155 0.045306 0.048085 0.039952 0.041967 0.041600 0.040325 0.052525 0.046292 0.040796 0.044877 0.044128 0.041163 0.036491 0.049083 0.044222

anat/EPI mask Dice coef : 0.902095
maximum F-stat (masked) : 9.3346

James
Subject Author Posted

find condition #s of censored TRs?

mmontchal February 11, 2016 01:51PM

Re: find condition #s of censored TRs?

jkeidel February 12, 2016 09:05AM

Re: find condition #s of censored TRs?

rick reynolds February 12, 2016 01:43PM

Re: find condition #s of censored TRs?

mmontchal February 17, 2016 03:42PM

Re: find condition #s of censored TRs?

rick reynolds February 17, 2016 03:54PM

Re: find condition #s of censored TRs?

mmontchal February 17, 2016 04:49PM

Re: find condition #s of censored TRs?

rick reynolds February 17, 2016 10:11PM

Re: find condition #s of censored TRs?

mmontchal February 18, 2016 06:40PM

Re: find condition #s of censored TRs?

rick reynolds February 18, 2016 10:41PM

Re: find condition #s of censored TRs?

mmontchal February 22, 2016 08:06PM

Re: find condition #s of censored TRs?

rick reynolds February 22, 2016 08:25PM