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History of AFNI updates  

|
March 04, 2016 01:23AM
Hello AFNI experts,
3dTproject been crashing on our system with the following error. Any suggestions on how to fix this?
Thanks,
Kai

++ 3dTproject: AFNI version=AFNI_2011_12_21_1014 (Aug 4 2015) [64-bit]
++ Authored by: Cox the Algebraic (Linear)
++ Setting up regressors
+ Block #0: 232 time points -- 206 stopband regressors
+ 1 Blocks * 3 polynomials -- 3 polort regressors
+ -- 15 other fixed ort regressors
++ 232 retained time points MINUS 224 regressors ==> 8 D.O.F. left
++ 210552 voxels in the spatial automask
*** glibc detected *** /usr/local/afni-xorg7-2011_12_21_1014-20150810/3dTproject: malloc(): memory corruption: 0x00000000342e63c0 ***
======= Backtrace: =========
/lib64/libc.so.6[0x3744a75f4e]
/lib64/libc.so.6[0x3744a7a41a]
/lib64/libc.so.6(__libc_malloc+0x5c)[0x3744a7ab1c]
/usr/local/afni-xorg7-2011_12_21_1014-20150810/3dTproject[0x44f590]
/usr/local/afni-xorg7-2011_12_21_1014-20150810/3dTproject[0x44f979]
/usr/local/afni-xorg7-2011_12_21_1014-20150810/3dTproject[0x40a72a]
/usr/local/afni-xorg7-2011_12_21_1014-20150810/3dTproject[0x40b402]
/lib64/libc.so.6(__libc_start_main+0xfd)[0x3744a1ed5d]
/usr/local/afni-xorg7-2011_12_21_1014-20150810/3dTproject[0x408169]
======= Memory map: ========
00400000-00890000 r-xp 00000000 fc:20 30566341 /sw/local/afni-xorg7-2011_12_21_1014-20150810/3dTproject
0098f000-009d8000 rw-p 0048f000 fc:20 30566341 /sw/local/afni-xorg7-2011_12_21_1014-20150810/3dTproject
009d8000-00a10000 rw-p 00000000 00:00 0
023ac000-34ef8000 rw-p 00000000 00:00 0 [heap]
3744600000-3744620000 r-xp 00000000 fd:00 396007 /lib64/ld-2.12.so
374481f000-3744820000 r--p 0001f000 fd:00 396007 /lib64/ld-2.12.so
3744820000-3744821000 rw-p 00020000 fd:00 396007 /lib64/ld-2.12.so
3744821000-3744822000 rw-p 00000000 00:00 0
3744a00000-3744b8a000 r-xp 00000000 fd:00 418223 /lib64/libc-2.12.so
3744b8a000-3744d8a000 ---p 0018a000 fd:00 418223 /lib64/libc-2.12.so
3744d8a000-3744d8e000 r--p 0018a000 fd:00 418223 /lib64/libc-2.12.so
3744d8e000-3744d8f000 rw-p 0018e000 fd:00 418223 /lib64/libc-2.12.so
3744d8f000-3744d94000 rw-p 00000000 00:00 0
3744e00000-3744e83000 r-xp 00000000 fd:00 421979 /lib64/libm-2.12.so
3744e83000-3745082000 ---p 00083000 fd:00 421979 /lib64/libm-2.12.so
3745082000-3745083000 r--p 00082000 fd:00 421979 /lib64/libm-2.12.so
3745083000-3745084000 rw-p 00083000 fd:00 421979 /lib64/libm-2.12.so
3745200000-3745208000 r-xp 00000000 fd:00 172518 /usr/lib64/libXp.so.6.2.0
3745208000-3745407000 ---p 00008000 fd:00 172518 /usr/lib64/libXp.so.6.2.0
3745407000-3745408000 rw-p 00007000 fd:00 172518 /usr/lib64/libXp.so.6.2.0
3745600000-3745602000 r-xp 00000000 fd:00 419011 /lib64/libdl-2.12.so
3745602000-3745802000 ---p 00002000 fd:00 419011 /lib64/libdl-2.12.so
3745802000-3745803000 r--p 00002000 fd:00 419011 /lib64/libdl-2.12.so
3745803000-3745804000 rw-p 00003000 fd:00 419011 /lib64/libdl-2.12.so
3745a00000-3745a15000 r-xp 00000000 fd:00 421980 /lib64/libz.so.1.2.3
3745a15000-3745c14000 ---p 00015000 fd:00 421980 /lib64/libz.so.1.2.3
3745c14000-3745c15000 r--p 00014000 fd:00 421980 /lib64/libz.so.1.2.3
3745c15000-3745c16000 rw-p 00015000 fd:00 421980 /lib64/libz.so.1.2.3
3747600000-3747602000 r-xp 00000000 fd:00 134215 /usr/lib64/libXau.so.6.0.0
3747602000-3747802000 ---p 00002000 fd:00 134215 /usr/lib64/libXau.so.6.0.0
3747802000-3747803000 rw-p 00002000 fd:00 134215 /usr/lib64/libXau.so.6.0.0
3747a00000-3747b37000 r-xp 00000000 fd:00 155067 /usr/lib64/libX11.so.6.3.0
3747b37000-3747d37000 ---p 00137000 fd:00 155067 /usr/lib64/libX11.so.6.3.0
3747d37000-3747d3d000 rw-p 00137000 fd:00 155067 /usr/lib64/libX11.so.6.3.0
3748200000-374821e000 r-xp 00000000 fd:00 134217 /usr/lib64/libxcb.so.1.1.0
374821e000-374841d000 ---p 0001e000 fd:00 134217 /usr/lib64/libxcb.so.1.1.0
374841d000-374841e000 rw-p 0001d000 fd:00 134217 /usr/lib64/libxcb.so.1.1.0
3748600000-3748626000 r-xp 00000000 fd:00 423535 /lib64/libexpat.so.1.5.2
3748626000-3748825000 ---p 00026000 fd:00 423535 /lib64/libexpat.so.1.5.2
3748a00000-3748a11000 r-xp 00000000 fd:00 142609 /usr/lib64/libXext.so.6.4.0
3748a11000-3748c11000 ---p 00011000 fd:00 142609 /usr/lib64/libXext.so.6.4.0
3748c11000-3748c12000 rw-p 00011000 fd:00 142609 /usr/lib64/libXext.so.6.4.0
3748e00000-3748e34000 r-xp 00000000 fd:00 143258 /usr/lib64/libfontconfig.so.1.4.4
3748e34000-3749034000 ---p 00034000 fd:00 143258 /usr/lib64/libfontconfig.so.1.4.4
3749034000-3749036000 rw-p 00034000 fd:00 143258 /usr/lib64/libfontconfig.so.1.4.4
3749200000-3749214000 r-xp 00000000 fd:00 172519 /usr/lib64/libXft.so.2.3.1
3749214000-3749414000 ---p 00014000 fd:00 172519 /usr/lib64/libXft.so.2.3.1
3749414000-3749415000 rw-p 00014000 fd:00 172519 /usr/lib64/libXft.so.2.3.1
3749600000-3749698000 r-xp 00000000 fd:00 141312 /usr/lib64/libfreetype.so.6.3.22
3749698000-3749897000 ---p 00098000 fd:00 141312 /usr/lib64/libfreetype.so.6.3.22
3749897000-374989d000 rw-p 00097000 fd:00 141312 /usr/lib64/libfreetype.so.6.3.22
3749a00000-3749a25000 r-xp 00000000 fd:00 134258 /usr/lib64/libpng12.so.0.49.0
3749a25000-3749c25000 ---p 00025000 fd:00 134258 /usr/lib64/libpng12.so.0.49.0
3749c25000-3749c26000 rw-p 00025000 fd:00 134258 /usr/lib64/libpng12.so.0.49.0
3749e00000-3749e09000 r-xp 00000000 fd:00 172500 /usr/lib64/libXrender.so.1.3.0
3749e09000-374a008000 ---p 00009000 fd:00 172500 /usr/lib64/libXrender.so.1.3.0
374a008000-374a009000 rw-p 00008000 fd:00 172500 /usr/lib64/libXrender.so.1.3.0
374fa00000-374fa18000 r-xp 00000000 fd:00 172517 /usr/lib64/libXmu.so.6.2.0
Fatal Signal 6 (SIGABRT) received
TPR_process_data
3dTproject
Bottom of Debug Stack
** AFNI version = AFNI_2011_12_21_1014 Compile date = Aug 4 2015
** [[Precompiled binary linux_xorg7_64: Aug 4 2015]]
** Program Death **
** If you report this crash to the AFNI message board,
** please copy the error messages EXACTLY, and give
** the command line you used to run the program, and
** any other information needed to repeat the problem.
** You may later be asked to upload data to help debug.
** Crash log is appended to file /home/despoB/kaihwang/.afni.crashlog
Subject Author Posted

3dTproject error

kah124 March 04, 2016 01:23AM

Re: 3dTproject error

Bob Cox March 07, 2016 06:24PM

Re: 3dTproject error

kah124 March 08, 2016 05:37PM

Re: 3dTproject error

rick reynolds March 08, 2016 07:02PM

Re: 3dTproject error

Bob Cox March 09, 2016 02:02AM

Re: 3dTproject error

Daniel Glen March 09, 2016 12:05PM

Re: 3dTproject error

Bob Cox March 17, 2016 02:38PM