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AFNI Message Board
Dear AFNI users-
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely, AFNI HQ
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely, AFNI HQ
| July 13, 2016 03:29PM | |
Hi Rick,
Thanks for the suggestions. I am pasting below the output from 3dttest++ beginning after the output .BRIK has already been written to the disk; I also tried the file_test command as per your last message on the script file and no problems were reported.
+ Added 12 FDR curves to dataset
++ Output dataset ./NewStream_VSseed_7_13_2016_clustsimtest_82subs_ControlsPIs_age_motion_gender_checkforgroupdiffsinCBCLsubs_noCBCLregressors_080_fu1fixed_80overlapmask_clustsim+tlrc.BRIK
++ Output dataset ./3dttest_residuals_test_7_13_2016+tlrc.BRIK
+ 2-sample test: results are ControlsRest - PIsResting
++ ================ Starting -clustsim calculations ================
+ ===== temporary files will have prefix TT.pAUC8mFBV5H =====
+ ===== running 16 -randomsign jobs (626 iterations per job) =====
++ 3dttest++: AFNI version=AFNI_16.1.28 (Jun 30 2016) [64-bit]
++ Authored by: Zhark++
++ 49053 voxels in -mask dataset
** FATAL ERROR: Option -setA (long form): need at least 2 datasets
** Program compile date = Jun 30 2016
+ ===== jobs have finished (1.00 s elapsed) =====
+ ===== starting 3dClustSim =====
++ 3dClustSim: AFNI version=AFNI_16.1.28 (Jun 30 2016) [64-bit]
++ Authored by: RW Cox and BD Ward
Fatal Signal 11 (SIGSEGV) received
THD_open_tcat
THD_open_dataset
get_options
3dClustSim
Bottom of Debug Stack
** AFNI version = AFNI_16.1.28 Compile date = Jun 30 2016
** [[Precompiled binary linux_xorg7_64: Jun 30 2016]]
** Program Death **
** If you report this crash to the AFNI message board,
** please copy the error messages EXACTLY, and give
** the command line you used to run the program, and
** any other information needed to repeat the problem.
** You may later be asked to upload data to help debug.
** Crash log is appended to file /space/raid/home/dfareri/.afni.crashlog
** FATAL ERROR: ===== 3dClustSim command failed
(( =====
** Program compile date = Jun 30 2016
Thanks for the suggestions. I am pasting below the output from 3dttest++ beginning after the output .BRIK has already been written to the disk; I also tried the file_test command as per your last message on the script file and no problems were reported.
+ Added 12 FDR curves to dataset
++ Output dataset ./NewStream_VSseed_7_13_2016_clustsimtest_82subs_ControlsPIs_age_motion_gender_checkforgroupdiffsinCBCLsubs_noCBCLregressors_080_fu1fixed_80overlapmask_clustsim+tlrc.BRIK
++ Output dataset ./3dttest_residuals_test_7_13_2016+tlrc.BRIK
+ 2-sample test: results are ControlsRest - PIsResting
++ ================ Starting -clustsim calculations ================
+ ===== temporary files will have prefix TT.pAUC8mFBV5H =====
+ ===== running 16 -randomsign jobs (626 iterations per job) =====
++ 3dttest++: AFNI version=AFNI_16.1.28 (Jun 30 2016) [64-bit]
++ Authored by: Zhark++
++ 49053 voxels in -mask dataset
** FATAL ERROR: Option -setA (long form): need at least 2 datasets
** Program compile date = Jun 30 2016
+ ===== jobs have finished (1.00 s elapsed) =====
+ ===== starting 3dClustSim =====
++ 3dClustSim: AFNI version=AFNI_16.1.28 (Jun 30 2016) [64-bit]
++ Authored by: RW Cox and BD Ward
Fatal Signal 11 (SIGSEGV) received
THD_open_tcat
THD_open_dataset
get_options
3dClustSim
Bottom of Debug Stack
** AFNI version = AFNI_16.1.28 Compile date = Jun 30 2016
** [[Precompiled binary linux_xorg7_64: Jun 30 2016]]
** Program Death **
** If you report this crash to the AFNI message board,
** please copy the error messages EXACTLY, and give
** the command line you used to run the program, and
** any other information needed to repeat the problem.
** You may later be asked to upload data to help debug.
** Crash log is appended to file /space/raid/home/dfareri/.afni.crashlog
** FATAL ERROR: ===== 3dClustSim command failed
(( =====
** Program compile date = Jun 30 2016
| Subject | Author | Posted |
|---|---|---|
|
dsf | July 06, 2016 10:04AM |
|
Phil Burton | July 06, 2016 03:12PM |
|
dsf | July 06, 2016 08:54PM |
|
Phil Burton | July 07, 2016 12:16PM |
|
dsf | July 11, 2016 01:38PM |
|
Phil Burton | July 11, 2016 03:38PM |
|
rick reynolds | July 11, 2016 04:09PM |
|
dsf | July 13, 2016 03:29PM |
|
Bob Cox | July 14, 2016 10:28AM |
|
Bob Cox | July 14, 2016 10:47AM |
|
dsf | July 14, 2016 04:15PM |
|
Bob Cox | July 14, 2016 04:38PM |
|
rick reynolds | July 14, 2016 06:15PM |
|
rick reynolds | July 14, 2016 09:43PM |
|
dsf | July 15, 2016 04:18PM |
