AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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July 23, 2016 01:54AM
HI List experts,

I have a question in my mind, but I have never be such clear.

For the 3dDeconvolve step (of course, based on each subject), if I really do not collapse the regressors, I have about 70~80 regressors. Is that fine for a 3dDeconvolve? In detail,in my experiment, there are 5 runs, each run has 72 trials. The design is (6 SOAs x 6 Event conditions) x 10 repetitions/observations. As I have 6 SOA x 6 Event condition, so for the stimuli onset, I have 36 regressors. Then for the response stage, also 36 regressors. For them, totally 36+36=72 regressors. If I also include the error regressor, miss regressor, and then 6 motion regressors, then totally 80 regressors.

For each regressor, it has about 10 observations, i.e., each run has 2 observations for that event. For instance, the timeonsets for one regressor go below.

187.64 428.00
472.80 508.88
23.53 296.02
74.16 144.41
172.32 341.69

Is that fine that I run a 3dDeconvolve, with 80 regressors? How many is "TOO many"? Any good pointers?

Thanks so much,
Juan
Subject Author Posted

a question on number of regressors in 3dDeconvolve

Juan July 23, 2016 01:54AM

Re: a question on number of regressors in 3dDeconvolve

Juan July 23, 2016 02:27AM

Re: a question on number of regressors in 3dDeconvolve

rick reynolds July 25, 2016 09:01AM

Re: a question on number of regressors in 3dDeconvolve

Juan July 26, 2016 06:16PM

Re: a question on number of regressors in 3dDeconvolve

Juan July 26, 2016 06:47PM

Re: a question on number of regressors in 3dDeconvolve

rick reynolds July 26, 2016 09:06PM