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August 15, 2016 09:42AM
Hi AFNI experts,

I am attempting to merge Examples 8 (surface) and 11 (resting-state) from the afni_proc.py help to run rs analyses on the surface, but I am getting an error. The error is here:

** -regress_anaticor: not ready for surface analysis
** script creation failure for block 'regress'

Something seems to not be merged properly in my command between the two examples. Any idea what is going on here? My afni_proc.py command is below.

Thanks in advance,
Kara

afni_proc.py -subj_id 2000513 \
-blocks despike ricor tshift align volreg surf blur mask regress \
-copy_anat fs/SUMA/2000513_SurfVol \
-anat_follower_ROI aaseg anat fs/SUMA/aparc.a2009s+aseg_rank.nii \
-anat_follower_ROI aeseg epi fs/SUMA/aparc.a2009s+aseg_rank.nii \
-anat_follower_ROI 2000513vente epi 2000513_vent.nii \
-anat_follower_ROI 2000513WMe epi 2000513_WM.nii \
-anat_follower_erode 2000513vente 2000513WMe \
-dsets func_run1+orig.HEAD \
-surf_anat fs/SUMA/2000513_SurfVol+orig.HEAD \
-surf_spec fs/SUMA/std.141.2000513_lh.spec \
-surf_spec fs/SUMA/std.141.2000513_rh.spec \
-ricor_regs 2000513.slibase.1D \
-volreg_align_to MIN_OUTLIER \
-volreg_align_e2a \
-blur_size 6 \
-regress_ROI_PC 2000513vente 3 \
-regress_make_corr_vols aeseg 2000513vente \
-regress_ROI 2000513WMe \
-regress_anaticor_fast \
-regress_anaticor_label 2000513WMe \
-regress_censor_motion 0.2 \
-regress_censor_outliers 0.1 \
-regress_apply_mot_types demean deriv \
-regress_est_blur_errts \
-regress_run_clustsim no
Subject Author Posted

resting state analysis on the surface

kblacker August 15, 2016 09:42AM

Re: resting state analysis on the surface

rick reynolds August 17, 2016 09:17AM