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November 01, 2016 04:50PM
I am using the SFNR output as a voxel-wise covariate in 3dMVM, partly because my study includes multiple scanners, and I want to make sure that cohort differences aren't being affected by different SNR at different sites.

I can add the sfnr as a nuisance variable and it runs just fine, however if I try to add a contrast including SFNR (by adding, e.g. -gltCode 50 'Group 1*site1 sfnr : ' ) then I get the error

** Error:
Incorrect level coding in variable sfnr : :

Is it possible with the current 3dMVM program to get a contrast map including the voxel-wise variable?
Subject Author Posted

SNFR as voxel-wise covariate in 3dMVM

henrybrice November 01, 2016 04:50PM

Re: SNFR as voxel-wise covariate in 3dMVM

gang November 02, 2016 12:31PM

Re: SNFR as voxel-wise covariate in 3dMVM

henrybrice November 02, 2016 03:03PM