AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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November 14, 2016 04:20PM
Hi,

I have two separate problems when trying to run the proc.py file created by uber_subject.py

1.) I get the following error with one participant:
0m '-stim_times 1' file 'stimuli/ACL.letterA.final.92TR.1D' has 1 auxiliary values per time point [nopt=15]

ACL.letterA.final.92TR.1D is one of two stimulus timing files. There are 5 runs of 93 TRs for this task (the first data point removed).

2.) For a different experiment, we keep getting an error saying:
* warnings for local stim_times format of file /home/data/A110211/110211A/A110211_intn_BL.new.FIXED.1D
- row 0 : time 134 exceeds run dur 0.182
- row 1 : time 124 exceeds run dur 0.182
* 9 row times exceed run dur 0.182 ...

We get this for all 5 stimulus timing files. There are 9 runs for this experiment, each with 93 TRs (we remove 2 at the beginning for a total of 91 TRs). The runs are longer than .182 seconds. Somehow the orders of magnitude seems off as 182 would be the number of seconds in the runs after the first 2 TRs were removed.

Much thanks!
Wendy
Subject Author Posted

proc.py fatal error

wehuddle November 14, 2016 04:20PM

Re: proc.py fatal error

rick reynolds November 14, 2016 09:46PM

Re: proc.py fatal error

wehuddle November 16, 2016 10:45PM

Re: proc.py fatal error

rick reynolds November 17, 2016 11:57AM