AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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ptaylor
December 01, 2016 11:02AM
(I split this new question into a new thread.)

Hmm, so Gang's AFNI function rPkgsInstall doesn't install R-- for that, you need to use your package manage (-> Aptitude, on Ubuntu).

So, what is returned by: 
$ which R
and 
$ afni_system_check.py -check_all
?

The second command shouldn't need to be run from with the 'abin' directory-- it should be in your path.

The Ubuntu 16.04 setup has a couple quirks from the earlier version builds-- but it sounds like you have already dealt with a couple. Are you following these install instructions here:
[afni.nimh.nih.gov]
... with adding in a couple different steps? If so, have you followed Step 5 to get R?

--pt
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Subject Author Posted

Re: rPkgsInstall

Ahmadi December 01, 2016 10:30AM

Re: rPkgsInstall

ptaylor December 01, 2016 11:02AM