AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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May 15, 2017 01:15PM
Hi- Thanks for your responses so far.

I have some questions about the output of 3dttest++ with a covariate.
- Say I have whole-brain single-subject betas from an amplitude-modulated regressor (say, trial-by-trial prediction error estimates.
- Say my covariate is some score from a questionnaire, like childhood trauma, or Beck Depression Inventory (one score per subject).
- Say I have no other between-subjects or within-subjects factors.

3dttest++ spits out a mean and a t-stat for both your dataset label (where the mean prediction-error-evoked beta for the group differs from zero) and your covariate (say, trauma score).

My question is: what do those means and t-stats REPRESENT? Do they represent the main effect of each factor, controlling for the other? Do they represent the main effect of each factor, NOT controlling for the other? Is it possible to define an interaction term, in this case? Is it possible to do this with 3dMVM? Or is it impossible, because it is not really multivariate?

Thanks,

Jim Waltz
Subject Author Posted

Whole-brain Multiple Regression in AFNI

James Waltz January 07, 2017 08:55PM

Re: Whole-brain Multiple Regression in AFNI

gang January 08, 2017 07:39PM

Re: Whole-brain Multiple Regression in AFNI

Bob Cox January 09, 2017 06:42AM

Re: Whole-brain Multiple Regression in AFNI

James Waltz May 15, 2017 01:15PM

Re: Whole-brain Multiple Regression in AFNI

gang May 15, 2017 08:58PM

Re: Whole-brain Multiple Regression in AFNI

James Waltz May 15, 2017 09:17PM

Re: Whole-brain Multiple Regression in AFNI

gang May 16, 2017 03:56PM

Re: Whole-brain Multiple Regression in AFNI

James Waltz May 16, 2017 05:17PM

Re: Whole-brain Multiple Regression in AFNI

gang May 17, 2017 11:34AM

Re: Whole-brain Multiple Regression in AFNI

James Waltz May 22, 2017 10:59AM

Re: Whole-brain Multiple Regression in AFNI

gang May 23, 2017 12:06PM

Re: Whole-brain Multiple Regression in AFNI

James Waltz May 23, 2017 05:17PM

Re: Whole-brain Multiple Regression in AFNI

gang May 24, 2017 02:21PM