Hello,

I've been going through the latest installation instructions in preparation for next week's bootcamp (I'm on a Mac OS 10.11.6), and I've run into trouble at step 3. I already have XQuartz installed (and I just updated it), and Step 2 (AFNI installation) appeared to be completed, yet when I run "sudo rPkgsInstall -pkgs ALL", I get the following error:

sudo: rPkgsInstall: command not found

I already have R version 3.3.2 installed. I decided to move on to the next steps to see if they would help this issue; the PyQt4 installation seemed to work, but then "suma -update_env" and "afni_system_check.py -check_all" gave me "command not found." This leads me to think that AFNI did not install correctly in step 2.

Perhaps I'm missing something obvious...should I be copying and pasting the commands into Terminal exactly as they appear in the instructions, or should I be editing something?

Also, in case you weren't aware, the "FAQ and debugging common error messages" is blank; it just says "EDIT."



Edited 1 time(s). Last edit at 02/08/2017 09:07AM by treagol.