Hi Gang,
Thanks so much! I am a bit confused...how would I apply the mask to the output of 3dMVM? So I have my lets say whole brain ANOVA with my main effects and interaction. Is there a way to then restrict my analyses to the mask (for small volume correction...use amygdala as a search space) in the gui? Or are you saying to just extract the parameter estimates from the entire amygdala mask? I was initially planning to use the mask as a search space. Are there any significant voxels within this mask, not necessarily the entire mask.
Thank you,
Emily