Rick,
Thanks for your help. I think I've got it 90% working. I'm able to direct it to the majority of the files in the subfolder (including the stats dataset, the errts dataset, etc). However, for some reason I can't get it to recognize the mask dataset. I've triple-checked that I've spelled everything correctly, and each time I get the message "** no mask_dset dset, cannot drive view_stats, skipping..." This is with using the argument:
-uvar mask_dset [Foldername]/[filename].HEAD
Any idea what I could be missing? The full command is below just in case (it runs perfectly if the mask_dset line is omitted, but doesn't include that info in the @ss_review_basic output)
Thanks!
GLM subfolder name: Retrieval_Long
Single test subject name: ERwD004
gen_ss_review_scripts.py -mot_limit 0.3 -exit0 \
-out_limit 0.1 \
-uvar xmat_uncensored Retrieval_Long/X.nocensor.xmat.1D \
-uvar stats_dset Retrieval_Long/stats.ERwD004+tlrc.HEAD \
-motion_dset ERwD004.dfile_rall.1D \
-uvar mask_dset Retrieval_Long/full_mask.ERwD004+tlrc.HEAD \
-uvar sum_ideal Retrieval_Long/sum_ideal.1D \
-uvar errts_dset Retrieval_Long/errts.ERwD004+tlrc.HEAD \
-uvar tsnr_dset Retrieval_Long/TSNR.ERwD004+tlrc.HEAD \
-uvar gcor_dset Retrieval_Long/out.gcor.1D \
-xmat_regress X.xmat.1D \
-censor_dset motion_ERwD_censor.1D