AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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herrlich10
March 30, 2017 10:04PM
Dear experts,

For an experiment containing 12 runs and 3 tasks (A, B, C) arranged in an interleaved manner (A-B-C-A-B-C-A-B-C-A-B-C), is it possible to construct a single afni_proc.py command to preprocess all 12 runs together (so that, e.g., we may have a better quality mean EPI volume) and do 3 separate 3dDeconvolve for each of the tasks?

If not, is it possible to use afni_proc.py in two steps: one for preprocessing, another for regression? How to specify the inputs for the regression afni_proc.py?
Or should I forget about afni_proc.py and simply go back to construct plain 3dDeconvolve manually?

Thanks!
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Subject Author Posted

Specify multiple regression analyses with afni_proc.py

herrlich10 March 30, 2017 10:04PM

Re: Specify multiple regression analyses with afni_proc.py

rick reynolds March 31, 2017 08:48AM

Re: Specify multiple regression analyses with afni_proc.py

herrlich10 March 31, 2017 11:24PM

Re: Specify multiple regression analyses with afni_proc.py

rick reynolds April 01, 2017 09:28AM