AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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rick reynolds
May 18, 2017 08:30AM
Hi Vittal,

There are a few things worth saying about that:

That dataset is not actually needed for the analysis, or any other part
of the afni_proc.py command (except for the correlation volume from
"-regress_make_corr_vols aeseg", which is not needed, either). It is
merely there to put each subject's FS atlas in the destination space.
So you do not need to include those datasets.

But they should be in the SUMA directory created by Make_Spec_FS.

Going to the SUMA directory, what is the output from:
ls -l aparc.a2009s*

- rick
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Example 11 in afni_proc.py "dataset is not found"

Vittal Korann May 18, 2017 04:21AM

Re: Example 11 in afni_proc.py "dataset is not found"

rick reynolds May 18, 2017 08:30AM

Re: Example 11 in afni_proc.py "dataset is not found"

Vittal Korann May 19, 2017 04:15AM

Resting state ALFF values

Vittal Korann May 24, 2017 10:32AM