AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
June 23, 2017 03:37PM
First, the '-volreg' option can only be used when you input exactly the '[1..6]' columns (roll pitch yaw dS dL dP). If you input anything else, the labels will be wrong (as you've seen). You can only get what you want by putting the desired labels in manually, as in
  1dplot ... -ynames dS dL dP - Task3dmotion.1D'[4..6]'
where the standalone '-' means 'this is the end of the -ynames list'.

As far as the graph you show, that is clearly all 9 columns of the file. Since you limit the y-axis range to be -4..4, the first column ('n') will go out of range at row 5. The last 2 columns ('rmsold', 'rmsnew') are probably out of this range entirely, so nothing is shown for them.
Subject Author Posted

Goofy plots of volreg outputs in 1dplot when invoking certain columns Attachments

jmbjork June 23, 2017 01:54PM

Re: Goofy plots of volreg outputs in 1dplot when invoking certain columns

Bob Cox June 23, 2017 03:37PM

Re: Goofy plots of volreg outputs in 1dplot when invoking certain columns

jmbjork June 26, 2017 08:38AM