AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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July 03, 2017 11:41AM
Thanks Rick!

This made me think of a follow up question related to the relationship between 3dDeconvolve and 3dTproject:

When running a typical resting state pre-processing with Anaticor the X-matrix is generated by 3dD usually with a polort of 2 or 3. I.e. the X.mat contains these drift regressors.

But when running the 3dTproject command with this X.mat (and anaticor regressors) the polort option is set to (in the proc) to -polort 0. Would this not mean that two 0th order regeressors are used? One from the X.mat and one from the option in 3dTproject?

We are running some stand alone regressions and want to clean volreg data with anaticor and were confused when it came to the -polort settings on these two functions. It would feel best if one had e.g. -polort 3 and the other -1 (off).

Thanks!
Subject Author Posted

Slow regression when using bandpass filtering

Robin June 26, 2017 10:53AM

Re: Slow regression when using bandpass filtering

rick reynolds June 26, 2017 02:00PM

Re: Slow regression when using bandpass filtering

Robin June 26, 2017 03:15PM

Re: Slow regression when using bandpass filtering

rick reynolds June 26, 2017 04:07PM

Re: Slow regression when using bandpass filtering

Robin June 26, 2017 04:31PM

Re: Slow regression when using bandpass filtering

rick reynolds June 28, 2017 10:10AM

Re: Slow regression when using bandpass filtering

Robin July 03, 2017 11:41AM

Re: Slow regression when using bandpass filtering

rick reynolds July 05, 2017 03:45PM

Re: Slow regression when using bandpass filtering

Robin July 05, 2017 05:14PM

Re: Slow regression when using bandpass filtering

koutb sawy August 07, 2017 12:08AM