AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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nlanderson9
July 12, 2017 11:33AM
I've been running a script on another machine that hasn't had any issues. I recently moved to a new machine and attempted to run the same script, with the following error: 

3dNwarpApply -source anat_mprage_unif_ns_shft+orig -master anat_final.ERwD001+tlrc -ainterp wsinc5 -nwarp anat.aff.qw_WARP.nii anat.aff.Xat.1D anat_mprage_unif_ns_shft_al_keep_mat.aff12.1D -prefix anat_wo_skull_warped
++ 3dNwarpApply: AFNI version=AFNI_17.1.12 (Jun 23 2017) [64-bit]
++ Authored by: Zhark the Warped
++ opened source dataset 'anat_mprage_unif_ns_shft+orig'
++ -master dataset is 'anat_final.ERwD001+tlrc'
++ Processing -nwarp ** ERROR: Can't open dataset from file 'anat_mprage_unif_ns_shft_al_keep_mat.aff12.PŸ@`Ù'
** ERROR: Can't open/process 3D warp dataset 'anat_mprage_unif_ns_shft_al_keep_mat.aff12.PŸ@`Ù'
** ERROR: Can't compute nonlinear 3D warp from string 'anat.aff.qw_WARP.nii anat.aff.Xat.1D anat_mprage_unif_ns_shft_al_keep_mat.aff12.PŸ@`Ù'

** FATAL ERROR: Cannot process warp string 'anat.aff.qw_WARP.nii anat.aff.Xat.1D anat_mprage_unif_ns_shft_al_keep_mat.aff12.PŸ@`Ù'
** Program compile date = Jun 23 2017

For whatever reason, it replaced the ending of one of the .1D files with ".PŸ@`Ù". In another attempt to run the script (with the hopes that it was a random glitch) it gave me ".P?@G?" instead.

If anyone has any thoughts (or if I've missed something obvious) I'd appreciate it!


macOS Sierra version 10.12.5
afni -ver: Precompiled binary macosx_10.7_local: Jun 23 2017 (Version AFNI_17.1.12)
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Subject Author Posted

Error with 3dNwarpApply

nlanderson9 July 12, 2017 11:33AM

Re: Error with 3dNwarpApply

Peter Molfese July 12, 2017 11:49AM

Re: Error with 3dNwarpApply

rick reynolds July 12, 2017 09:23PM

Re: Error with 3dNwarpApply

nlanderson9 July 17, 2017 02:16PM