nick Wrote:
-------------------------------------------------------
> Daniel Glen Wrote:
> -------------------------------------------------------
> > The error looks like it really happens just
> before
> > with the count command,
>
> Thanks Daniel, indeed it seems a PATH issue.
> Please see [
github.com]
> for a Pull Request that should address the issue.
> If you think it does, could you please merge?
Thanks for merging - the PR did indeed resolve the issue.
For reference, the fix was changing the PATH variable so that the afni binary directory comes /first/, which probably deals with another conflicting 'count' command on the newer Ubuntu "Trusty" distributions. Earlier Ubuntu "Precise" did not seem to have a conflicting 'count' command.
For a related report and identical fix, see also [
afni.nimh.nih.gov]